use Laravel\Http\Request;
use Laravel\Routing\Route;

Route::get('gene_expression', 'GeneExpressionController@index');
Route::post('gene_expression/submit', 'GeneExpressionController@submit');

class GeneExpressionController extends Controller
{
    public function index(Request $request)
    {
        // 获取基因列表
        $genes = $request->input('genes');
        
        // 使用外部工具(例如 BioMart）获取基因表达数据
        $expressionData = getGeneExpressionData($genes);
        
        // 表达数据显示在视图中
        return view('gene_expression', ['expressionData' => $expressionData]);
    }
    
    public function submit(Request $request)
    {
        // 获取附加信息，例如，实验条件
        $experimentInfo = $request->input('experimentInfo');
        
        // 在数据库中存储基因表达数据和实验信息
        storeGeneExpressionData($expressionData, $experimentInfo);
        
        // 返回成功响应
        return response()->json(['status' => 'success']);
    }
}

use CodeIgniter\Config\Config;
use CodeIgniter\Controller;

class DnaSequenceAnalysis extends Controller
{
    public function index()
    {
        // 加载 BioPython 库
        Config::load('bio<a style='color:#f60; text-decoration:underline;' href="https://www.php.cn/zt/15730.html" target="_blank">python</a>');
        
        // 获取序列
        $sequence = $this->request->getPost('sequence');
        
        // 生成执行序列对齐和共识序列
        $alignment = Biopython\Align\PairwiseAlignment(Biopython\Seq($sequence));
        $consensus = $alignment.getConsensusSequence();
        
        // 结果显示在视图中
        return view('dna_sequence_analysis', ['sequence' => $sequence, 'alignment' => $alignment, 'consensus' => $consensus]);
    }
}